Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015789873.1_cds_XP_016498890.1_1220
CDS Infomation

[gene=LOC107817546] [db_xref=GeneID:107817546] [protein=zinc finger MYM-type protein 1-like] [protein_id=XP_016498890.1] [location=complement(101549..103027)] [gbkey=CDS]
Sequence

ATGTTTCAAGAAGATGCTAGATTTATCAAATCATCATCAATCAATTCAATTATTTTTGAT
AAGCACTCCGAGAAGTTAAAAAGTGAGTATCGAATGCGTTTAGAAGCATCAATTGATGTG
GCAAGACTTCTATTATTGTATGGATTGCCTTTTAGGGGCCATGACGAAAGTGAATCTTCA
ACAAATCAAGGCCTCTTTCAAGGATTCTTACGATGGCATGGGGACAAGCATCCGGATGTG
GGAAAAGTAATATTAGAAAATGCTCCACAAAATGATACTTTGACTTGCCCTATAATCCAA
AAGGATATTATCAATGCTTGTGCAAAAGAAACATTAAAGGCTATAATTGGAGACTTGAAT
GGAGATTACTTTGGTATATTAGTTGATGAGTCCAAAGATATCTCACACAAAGAACAAATG
GCTCTTGTTTTGTGTTATGTTGATAAGAATGGTGAAGTGGTAGAGCGATTTGTTGGTCTT
GTTCATGTTAGTGATACATCAGCATGCTCATTGAAGGAAACAATCTACTCTTTGCTTTCA
GACCACTCACTAAGTCCATCCCAAATACGTGGACAAGGTTATGATGGAGCTAGTAACATG
AGGGGAGAGATAAGTGGTCTTAAGACTTTGATTATGAAATACAGCTCATCGGCATATTAC
ATTCATTGCTTTGCTCATCAATTGCAATTAACACTTGTAGCTATGTCTAAAAAGCATTTG
GATGTCGAAGACTTCTTCTGTCATGTTACAAATGTGTTAAATGTCATTGGAGTATCTTTT
AAGCGCAGAGATTTGCTTCGCCATCTTCAAGCTGAAAAACTGGAGCAATTACTTGAGTCT
GGTGAAATTCATACCGGGCGAGTACTAAATCAAGAACGCGGGCTTCAAAGACTAGGTGAT
ACTCGTTGGAGATCACATTTCAAAACATTAGATAACTTTATTGTTATTTTCTCATCTATT
ATTCGTGTGCTTGAAGTGATTGAACATGAAGGTTCTACCTCAAATGAGAGAAATCAAGCA
AAATATCTTTTGAGTGAGATAATAACATTTAAATTTGTTTTTATGCTTCACTTGATGTTG
AAAGTTTTGGCAATGTCAAATGAGTTGAACAAGATCCTACAAAAGAGAGATCAAGATATT
GTTAATGCCGTGAAGTTTCTTAAGATTACAAAGAAAAGATTGCAAGATATGAGGGAAACT
GGATGGGAATCTTTGCTAGATGATGTTTCCTCATTTTGTCATATGCATGATATTATAATT
CCCAAGATGGATGAATCCTATTTTCCTGGAAAGTCGAAGCGCAAGTCTTCTGGTATTTGT
TATTCACACCACTTGCGTGTTGATATCTTTTATGCTGTAATTGATGTGCAACTTCAAGAG
CTTAATGACCGTTTTGGTGTAGTGAGTAGCGAATTGCTTCTTGGGATGGCTAGCTTGAAT
CCAGTCAATTCTTTTGCTAATTTGATAAAGGTAGAATAA

Peptide Sequence

PEP ID

XP_016498890.1
PEP Infomation

PREDICTED: zinc finger MYM-type protein 1-like [Nicotiana tabacum]
Sequence

MFQEDARFIKSSSINSIIFDKHSEKLKSEYRMRLEASIDVARLLLLYGLPFRGHDESESS
TNQGLFQGFLRWHGDKHPDVGKVILENAPQNDTLTCPIIQKDIINACAKETLKAIIGDLN
GDYFGILVDESKDISHKEQMALVLCYVDKNGEVVERFVGLVHVSDTSACSLKETIYSLLS
DHSLSPSQIRGQGYDGASNMRGEISGLKTLIMKYSSSAYYIHCFAHQLQLTLVAMSKKHL
DVEDFFCHVTNVLNVIGVSFKRRDLLRHLQAEKLEQLLESGEIHTGRVLNQERGLQRLGD
TRWRSHFKTLDNFIVIFSSIIRVLEVIEHEGSTSNERNQAKYLLSEIITFKFVFMLHLML
KVLAMSNELNKILQKRDQDIVNAVKFLKITKKRLQDMRETGWESLLDDVSSFCHMHDIII
PKMDESYFPGKSKRKSSGICYSHHLRVDIFYAVIDVQLQELNDRFGVVSSELLLGMASLN
PVNSFANLIKVE

Transcript Sequence

Gene sequence data has not been registered.